Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917712.1_cds_XP_016467239.1_60004
CDS Infomation

[gene=LOC107789880] [db_xref=GeneID:107789880] [protein=probable serine/threonine-protein kinase At5g41260] [protein_id=XP_016467239.1] [location=join(15248..15329,15428..15648,16228..16363,16639..16772,16845..16950,17146..17231,17372..17560,19088..19252,19767..19880,20175..20417)] [gbkey=CDS]
Sequence

ATGGGTGTTCACTGTTCCAAATTCTTTTTCTGCTGCGGCCATTCCCACCTCAAGCCATCT
CTGCACGATCTTTCTGATCTGGAGAATGGAGGGGAAAATGAGAAAAACGCGTTACCGAGT
TTTACTGAATTTAGTCTAGATGTGCTGATGATTGCAACTGATGGATTTTCTGCGGATAAT
ATAGTGTCTGAGCATGGTGAGAAAGCCCCAAATGTCGTTTATAAAGGCCTGCTCCAGAAT
GGTCACTCTATTGCTGTTAAACGCTTCAATAGGTCTGCTTGGCCTGATTCTCGCCAGTTC
TTGGATGAGGCTAAAGCAGTGGGGAATCTGAGGAGTGAGAGACTGGCAAATCTACTTGGA
TGTTGCTGCGAAGGGGATCAAAGGTTGCTCGTAGCAGAGTTCATGCCAAATGATACCCTA
GCAAAGCATTTATTTCACTGGGAGAGCGAACCTATGAAATGGGCGATGAGGTTGAGGGTC
GCTTTTTACTTAGCTCAAGCTTTGGAATACTGCTGCAGTAAGGGTCGAGCAATATATCAT
GATCTTAATGCTTACAGAATCTTATTTGATCAGGATGGTGATCCTAGGCTCTCTTGCTTT
GGCCTGATGAAGAACAGTAGAGATGGAAAAAGTTACAGTACAAACTTGGCTTTCACTCCT
CCAGAGTACATGAGAACAGGAAGAGTGACAGCTGAAAGTGTAGTTTACAGCTTCGGGACA
ATGTTGTTAGATCTTTTGAGTGGAAAACACATACCTCCGAGCCATGCACTTGATCTAATT
CGGGTGAAGAATTTCTCGACACTGATGGATTCTTGTTTGGAGGGTCGTATTTCTAATGAT
GACGGGACCGAGCTTGTGCGGTTAGCCACCCGTTCTTTACAGTATGAAGCACGTGAGAGG
CCAAATGCAAAATCTCTGGTTAATTCTCTCATGACTATTCAGAAAGAAACAGAGGTGCCA
TCACATGTTTTACTGGGCATTAGACATGGAACGGCGACCCCACCCCAACCATTGCTGTTG
ACAACAACAGGGGAAGCATGTTTGAGAATGGATCTTACTGCCCTTCATGAGATATTGCAA
AAGACAGGGTACAAGGATGATGAAGGAATTGCTAATGAGCTTTCGTTCCAAATGTGGACA
AATCAGATGCAGGAAACCTTGAACTCTAAGCAGCAAGGAGATGCTGCTTTCCGAGCCAAG
GATTCTATAACTGCCATTGAGTGCTATACACAGTTCAACGATGGAGGGACCATGGTGTCA
CCAACCATATACGCCAGGCGATGCTTGTGTTATCTAATGAGCGACATGGCACAAGAGGCT
CTAGGGGATGCAATGCAAGCTCAGGTTATATCTCCCGAGTGGCCAACTGCATTTTACCTT
CAGTCTGTTGCCCTTTTTAGCCTTGGGATGGAGAATGATGCCCAAGAAGCACTTAAACAA
GCTACAAAGTTGGAAGCAAAAAGGAACAAAAATTAA

Peptide Sequence

PEP ID

XP_016467239.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At5g41260 [Nicotiana tabacum]
Sequence

MGVHCSKFFFCCGHSHLKPSLHDLSDLENGGENEKNALPSFTEFSLDVLMIATDGFSADN
IVSEHGEKAPNVVYKGLLQNGHSIAVKRFNRSAWPDSRQFLDEAKAVGNLRSERLANLLG
CCCEGDQRLLVAEFMPNDTLAKHLFHWESEPMKWAMRLRVAFYLAQALEYCCSKGRAIYH
DLNAYRILFDQDGDPRLSCFGLMKNSRDGKSYSTNLAFTPPEYMRTGRVTAESVVYSFGT
MLLDLLSGKHIPPSHALDLIRVKNFSTLMDSCLEGRISNDDGTELVRLATRSLQYEARER
PNAKSLVNSLMTIQKETEVPSHVLLGIRHGTATPPQPLLLTTTGEACLRMDLTALHEILQ
KTGYKDDEGIANELSFQMWTNQMQETLNSKQQGDAAFRAKDSITAIECYTQFNDGGTMVS
PTIYARRCLCYLMSDMAQEALGDAMQAQVISPEWPTAFYLQSVALFSLGMENDAQEALKQ
ATKLEAKRNKN

Transcript Sequence

Gene sequence data has not been registered.